<?xml version="1.0" encoding="utf-8"?>
<journal>
<title>Vaccine Research</title>
<title_fa>Vaccine Research</title_fa>
<short_title>vacres</short_title>
<subject>Medical Sciences</subject>
<web_url>http://vacres.pasteur.ac.ir</web_url>
<journal_hbi_system_id>1</journal_hbi_system_id>
<journal_hbi_system_user>admin</journal_hbi_system_user>
<journal_id_issn>2383-2819</journal_id_issn>
<journal_id_issn_online>2423-4923</journal_id_issn_online>
<journal_id_pii></journal_id_pii>
<journal_id_doi>10.61186/vacres</journal_id_doi>
<journal_id_iranmedex></journal_id_iranmedex>
<journal_id_magiran></journal_id_magiran>
<journal_id_sid></journal_id_sid>
<journal_id_nlai></journal_id_nlai>
<journal_id_science></journal_id_science>
<language>en</language>
<pubdate>
	<type>jalali</type>
	<year>1396</year>
	<month>8</month>
	<day>1</day>
</pubdate>
<pubdate>
	<type>gregorian</type>
	<year>2017</year>
	<month>11</month>
	<day>1</day>
</pubdate>
<volume>4</volume>
<number>3</number>
<publish_type>online</publish_type>
<publish_edition>1</publish_edition>
<article_type>fulltext</article_type>
<articleset>
	<article>


	<language>fa</language>
	<article_id_doi></article_id_doi>
	<title_fa></title_fa>
	<title>Comparative in silico analyses of proteins involved in serum resistance as promising vaccine candidates against Acinetobacter baumannii</title>
	<subject_fa></subject_fa>
	<subject></subject>
	<content_type_fa>Original article</content_type_fa>
	<content_type>Original article</content_type>
	<abstract_fa></abstract_fa>
	<abstract>&lt;div style=&quot;text-align: justify;&quot;&gt;&lt;strong&gt;Introduction:&lt;/strong&gt; &lt;em&gt;Acinetobacter baumannii&lt;/em&gt;&amp;nbsp;as a Gram-negative coccobacillus has become a major cause of hospital-acquired infections. The virulence factors involved in serum resistance are important targets in the development of an effective vaccine against this pathogen. Our aim in this project was &lt;em&gt;in silico&lt;/em&gt; analyses of &lt;em&gt;A. baumannii&lt;/em&gt; proteins involved in serum resistance which could potentially be used as efficient vaccines. &lt;strong&gt;Methods:&lt;/strong&gt; Based on computational procedures, we evaluated all &lt;em&gt;A. baumannii &lt;/em&gt;proteins involved in serum resistance, namely AbOmpA, PKF, PLD , PBP 7/8, CipA and Tuf SurA1, as vaccine candidates. Subcellular localization, sequence conservation, domain prediction and 3D modelings were analyzed by online tools. Moreover, the prevalence of serum resistance factors in 5 strains of &lt;em&gt;A. baumannii &lt;/em&gt;was characterized. The MHC-binding sites of class I and II were detected. Linear and conformational B cell epitopes were analyzed by 2 prediction servers. &lt;strong&gt;R&lt;/strong&gt;&lt;strong&gt;esults: &lt;/strong&gt;The MetaLocGramN server showed that AbOmpA, PKF, PBP7/8, phospholipase D, CipA, Tuf and SurA1 were outer membrane protein (56.32%), extracellular protein (58.74%), extracellular protein (52.59%), cytoplasmic protein (45.08%), extracellular protein (53.8%), Cytoplasmic protein (96.36%) and extracellular protein (58.23%), respectively. The OMD of AbOmpA, PKF, PBP7/8 and phospholipase D, CipA, Tuf and SurA1 were 0.060, 0.076, 0.08, 0.101, 0.09, 0.06 and 0.103, respectively. The numbers of immunogenic linear and conformational epitopes with high score (P &amp;ge; 0.6), extracted from beta-barrel of AbOmpA were 6 and 4; whereas these values for PKF were 10 and 4, respectively. &lt;strong&gt;Conclusion: &lt;/strong&gt;The &lt;em&gt;in silico&lt;/em&gt; analyses and reverse vaccinology criteria showed that AbOmpA and PKF had better attributes as vaccine targets and they could be considered as promising vaccine candidates against &lt;em&gt;A. baumannii&lt;/em&gt;.&lt;/div&gt;
</abstract>
	<keyword_fa></keyword_fa>
	<keyword>Acinetobacter baumannii, in silico analysis, serum resistance factors.</keyword>
	<start_page>64</start_page>
	<end_page>71</end_page>
	<web_url>http://vacres.pasteur.ac.ir/browse.php?a_code=A-10-1-44&amp;slc_lang=fa&amp;sid=1</web_url>


<author_list>
	<author>
	<first_name>A</first_name>
	<middle_name></middle_name>
	<last_name>Soltani Shirazi </last_name>
	<suffix></suffix>
	<first_name_fa></first_name_fa>
	<middle_name_fa></middle_name_fa>
	<last_name_fa></last_name_fa>
	<suffix_fa></suffix_fa>
	<email></email>
	<code></code>
	<orcid>0000-0003-0208-5741</orcid>
	<coreauthor>No</coreauthor>
	<affiliation>Department of Bacteriology, Pasteur Institute of Iran, Tehran, Iran.</affiliation>
	<affiliation_fa></affiliation_fa>
	 </author>


	<author>
	<first_name>O</first_name>
	<middle_name></middle_name>
	<last_name>Azizi </last_name>
	<suffix></suffix>
	<first_name_fa></first_name_fa>
	<middle_name_fa></middle_name_fa>
	<last_name_fa></last_name_fa>
	<suffix_fa></suffix_fa>
	<email></email>
	<code></code>
	<orcid>0000-0001-7759-8029</orcid>
	<coreauthor>No</coreauthor>
	<affiliation>Department of Basic Sciences, Torbat Heydariyeh University of Medical Sciences, Torbat Heydariyeh, Iran.</affiliation>
	<affiliation_fa></affiliation_fa>
	 </author>


	<author>
	<first_name>N</first_name>
	<middle_name></middle_name>
	<last_name>Bolourchi </last_name>
	<suffix></suffix>
	<first_name_fa></first_name_fa>
	<middle_name_fa></middle_name_fa>
	<last_name_fa></last_name_fa>
	<suffix_fa></suffix_fa>
	<email></email>
	<code></code>
	<orcid>0000-0001-9893-6656</orcid>
	<coreauthor>No</coreauthor>
	<affiliation>Department of Bacteriology, Pasteur Institute of Iran, Tehran, Iran.</affiliation>
	<affiliation_fa></affiliation_fa>
	 </author>


	<author>
	<first_name>Sh</first_name>
	<middle_name></middle_name>
	<last_name>Aghamohammad </last_name>
	<suffix></suffix>
	<first_name_fa></first_name_fa>
	<middle_name_fa></middle_name_fa>
	<last_name_fa></last_name_fa>
	<suffix_fa></suffix_fa>
	<email></email>
	<code></code>
	<orcid>0000-0003-1832-3695</orcid>
	<coreauthor>No</coreauthor>
	<affiliation>Department of Bacteriology, Pasteur Institute of Iran, Tehran, Iran.</affiliation>
	<affiliation_fa></affiliation_fa>
	 </author>


	<author>
	<first_name>F</first_name>
	<middle_name></middle_name>
	<last_name>Badmasti </last_name>
	<suffix></suffix>
	<first_name_fa></first_name_fa>
	<middle_name_fa></middle_name_fa>
	<last_name_fa></last_name_fa>
	<suffix_fa></suffix_fa>
	<email>fbadmasti2008@gmail.com</email>
	<code></code>
	<orcid>0000-0003- 3502-147X</orcid>
	<coreauthor>Yes
</coreauthor>
	<affiliation>Department of Bacteriology, Pasteur Institute of Iran, Tehran, Iran.</affiliation>
	<affiliation_fa></affiliation_fa>
	 </author>


</author_list>


	</article>
</articleset>
</journal>
